Latest update
2025-04-01
The data used for this project is from Yang et al., 2019: Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency.
For the purpuse of our project we realigned the count data for the transcriptomic data with the M11 mouse genome using STAR.
| UniprotID | GeneID | X0m | X1h | X6h | X12h | X24h | X36h | X48h | X72h | log2FC_0m_1h | log2FC_1h_6h | log2FC_6h_12h | log2FC_12h_24h | log2FC_24h_36h | log2FC_36h_48h | log2FC_48h_72h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Q8R3W2 | 0610009B22Rik | 22.88820 | 22.58756 | 22.85770 | 22.71333 | 22.49104 | 22.28791 | 22.55330 | 22.90905 | -0.3006400 | 0.2701394 | -0.1443739 | -0.22229103 | -0.20312630 | 0.2653944 | 0.35574601 |
| Q9DCS2 | 0610011F06Rik | 25.81078 | 26.28141 | 26.05348 | 25.91008 | 25.43775 | 24.96838 | 24.84230 | 25.63992 | 0.4706273 | -0.2279365 | -0.1433905 | -0.47233934 | -0.46936564 | -0.1260783 | 0.79762014 |
| Q8BHG2 | 0610037L13Rik | 28.65140 | 28.39190 | 28.52414 | 28.30400 | 28.25237 | 28.33117 | 28.45998 | 28.38369 | -0.2595007 | 0.1322361 | -0.2201394 | -0.05162924 | 0.07879782 | 0.1288167 | -0.07629738 |
| V9GXF1 | 1110065P20Rik | 24.46039 | 25.00402 | 24.59935 | 24.25717 | 24.35595 | 24.73614 | 24.76269 | 25.85162 | 0.5436275 | -0.4046702 | -0.3421763 | 0.09878239 | 0.38018522 | 0.0265473 | 1.08893786 |
| Q8WUR0 | 1600014C10Rik | 24.30800 | 23.75634 | 24.58228 | 25.11048 | 24.86278 | 25.11902 | 24.71790 | 23.50057 | -0.5516615 | 0.8259393 | 0.5282067 | -0.24770351 | 0.25624078 | -0.4011161 | -1.21733005 |
| J3QMC0 | 1700003H04Rik | 22.82848 | 24.14460 | 23.35124 | 23.62545 | 23.32869 | 23.17345 | 23.28715 | NA | 1.3161250 | -0.7933624 | 0.2742035 | -0.29675879 | -0.15523247 | 0.1136942 | NA |
| original_id | X0h_rep1 | X0h_rep2 | X1h_rep1 | X1h_rep2 | X6h_rep1 | X6h_rep2 | X12h_rep1 | X12h_rep2 | X24h_rep1 | X24h_rep2 | X36h_rep1 | X36h_rep2 | X48h_rep1 | X48h_rep2 | X72h_rep1 | X72h_rep2 | version | ensembl_base | gene_biotype | mgi_symbol |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ENSMUSG00000121438.1 | 486 | 535 | 599 | 526 | 971 | 975 | 790 | 801 | 941 | 847 | 886 | 581 | 414 | 629 | 99 | 161 | 1 | ENSMUSG00000121438 | lncRNA | |
| ENSMUSG00000109644.3 | 41 | 32 | 60 | 44 | 62 | 45 | 101 | 84 | 112 | 110 | 98 | 97 | 31 | 36 | 41 | 41 | 3 | ENSMUSG00000109644 | lncRNA | 0610005C13Rik |
| ENSMUSG00000108652.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | ENSMUSG00000108652 | lncRNA | 0610006L08Rik |
| ENSMUSG00000086714.3 | 12 | 23 | 14 | 21 | 21 | 21 | 19 | 26 | 20 | 26 | 33 | 23 | 30 | 61 | 50 | 71 | 3 | ENSMUSG00000086714 | lncRNA | 0610009E02Rik |
| ENSMUSG00000043644.6 | 49 | 34 | 69 | 66 | 38 | 34 | 53 | 41 | 56 | 62 | 62 | 43 | 41 | 66 | 103 | 91 | 6 | ENSMUSG00000043644 | lncRNA | 0610009L18Rik |
| ENSMUSG00000020831.19 | 33 | 27 | 34 | 55 | 48 | 41 | 65 | 63 | 57 | 81 | 70 | 65 | 47 | 60 | 83 | 73 | 19 | ENSMUSG00000020831 | protein_coding | 0610010K14Rik |